rs4325312 chr11:9314524 A>G
- Sequence
gttgcaggctccttactacgccga[A/G]gcgccacggctagagccacttccg
- ASB in cell types
- HEK293 (embryonic kidney) GM12891 (male B- cells lymphoblastoid cell line) GM12878 (female B-cells lymphoblastoid cell line) MDA-MB-231p27CK-DD (breast cancer cells, phosphimimetic p27 cell line)
- ASB for transcription factors
- CDK9_HUMAN STAG1_HUMAN CDN1B_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -1.46 | 2.05 | 1.00 | n/a | n/a | |||
| STAG1_HUMAN | 0.46 | 1.65 | 1.00 | n/a | n/a | |||
| CDN1B_HUMAN | 0.15 | 1.32 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.52 | 0.90 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Esophagus_Muscularis, Muscle_Skeletal, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood