rs4325349 chr12:52298886 C>G
- Sequence
aagatattttgagataagcataaa[C/G]tgtgtactgatcaaatcagagtac
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- GATA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | 1.41 | -0.10 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP acute lung injury following major trauma, hdl cholesterol, height, ldl cholesterol, systolic blood pressure (sbp), waist hip ratio
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Spinal_cord_cervical_c-1, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Prostate, Skin_Sun_Exposed_Lower_leg, Thyroid