rs4328101 chr1:200529300 C>T
- Sequence
aaaactgcataactgaaaacacca[C/T]gagtgactctgtgaagctctccca
- ASB in cell types
- A549 (lung carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| A549 (lung carcinoma) | -3.98 | 1.62 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, amyotrophic lateral sclerosis (als) age of onset, hdl cholesterol, height, ldl cholesterol, neuroblastoma (brain cancer), simpson-angus scale
GTEx eQTL Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Sigmoid, Nerve_Tibial, Testis, Vagina