rs4328434 chr16:81729535 G>A
- Sequence
ctgctgtgagcgccttcaagaggg[G/A]gcagcactgagctcacctgcgagc
- ASB in cell types
- LUHMES (lund human mesencephalic cells) GM17942 (lymphoblastoid cell) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.08 | 0.24 | 1.36 | -0.08 | Weak Concordant |
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Motif analysis
