rs4340803 chr4:123849710 A>G
- Sequence
ttacagctctataaatctcaagct[A/G]tattttgaacattcctgaaacacc
- ASB in cell types
- LNCaP (prostate carcinoma) TTC-1240 (Rhabdoid tumor of the kidney)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.35 | -1.25 | 1.75 | n/a | No Hit | |||
| ANDR_HUMAN | 1.85 | -0.45 | 1.67 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.57 | -0.05 | 1.00 | n/a | n/a |
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