rs4340868 chr4:8853503 T>G
- Sequence
tgcaagggaggctgggaaatgtag[T/G]ctttagctaagtgcccaactgaaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- THA11_HUMAN HCFC1_HUMAN NFYC_HUMAN ZN143_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| THA11_HUMAN | 2.88 | -4.26 | 1.33 | n/a | n/a | |||
| HCFC1_HUMAN | 3.50 | 0.37 | 2.00 | n/a | n/a | |||
| NFYC_HUMAN | 2.38 | n/a | 1.00 | n/a | No Hit | |||
| ZN143_HUMAN | 1.60 | n/a | 5.00 | -5.56 | Concordant |
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Motif analysis
