rs4345514 chr7:155147381 T>G

Sequence
acatgtatgaaactgccaagtcat[T/G]atacactcactgccagtgtttttt
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFE2_HUMAN ZN316_HUMAN MAFG_HUMAN EMSY_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFE2_HUMAN -0.70 1.89 0.993.4·10-6 1.50 -0.37 Weak Discordant
ZN316_HUMAN -0.44 2.60 0.942.6·10-4 2.00 n/a No Hit
MAFG_HUMAN -3.42 2.35 1.006.1·10-4 1.50 0.85 Weak Concordant
EMSY_HUMAN -4.24 2.44 1.000.01 1.50 n/a n/a
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Motif analysis

MAFG_HUMAN Weak Concordant
MAFG_HUMAN pic

Genetic associations

GRASP hdl cholesterol obesity with early age of onset (age >2) total cholesterol triglycerides

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