rs4347819 chr2:68252539 A>G
- Sequence
cccgcaacctcaaggcacgaaaaa[A/G]ggggagggcggagagggaggggaa
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) HEK293 (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line) BJ1-hTERT (Human fibroblast telomerase immortalized cell line)
- ASB for transcription factors
- ELF1_HUMAN SPT5H_HUMAN EGR1_HUMAN JUN_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 4.15 | -0.07 | 1.33 | n/a | No Hit | |||
| SPT5H_HUMAN | 1.70 | -0.13 | 1.00 | n/a | n/a | |||
| EGR1_HUMAN | -0.90 | 1.62 | 1.00 | n/a | No Hit | |||
| JUN_HUMAN | 1.16 | 0.62 | 1.13 | n/a | No Hit |
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