rs4353846 chr3:177448351 T>C

Sequence
cagtggttgtgtggtaaatatgta[T/C]tgattttatgtataatgtgcaggg
ASB for transcription factors
FOXA1_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA1_HUMAN n/a 1.88 1.000.04 2.00 -0.20 Weak Discordant
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Motif analysis

FOXA1_HUMAN Weak Discordant
FOXA1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  infant head circumference,  refractive error

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