rs4354858 chr14:105032736 T>C
- Sequence
cagcaccatgagagtttacaaatg[T/C]catggtaacgtcaggaagttaccc
- ASB in cell types
- breast tumor primary human epidermal keratinocytes
- ASB for transcription factors
- BRD4_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.37 | -2.38 | 1.00 | n/a | n/a | |||
| ESR1_HUMAN | 2.77 | -0.39 | 2.00 | -2.33 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood