rs4354907 chr15:39420729 G>A

Sequence
ggccagtgggtgtgtgcactgtgt[G/A]cgagccgaagcagggcgaggcatt
ASB in cell types
ESO-26 (Gastroesophageal junction adenocarcinoma) primary human epidermal keratinocytes
ASB for transcription factors
KLF5_HUMAN BRD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KLF5_HUMAN 3.46 n/a 1.3·10-41.00 1.33 n/a No Hit
BRD4_HUMAN 2.36 -2.38 0.011.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Mucosa Prostate Skin_Not_Sun_Exposed_Suprapubic

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