rs4356504 chr16:75075226 C>T

Sequence
tagggggaaagggctgaccttttt[C/T]ctgccagcagtactgtcaaggcct
ASB in cell types
K562 (myelogenous leukemia) CD34+ hematopoietic stem cells
ASB for transcription factors
TIF1B_HUMAN REQU_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TIF1B_HUMAN 2.48 n/a 0.031.00 2.00 n/a n/a
REQU_HUMAN 1.93 -0.47 0.041.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP amyotrophic lateral sclerosis (als),  fasting insulin,  hdl cholesterol,  homa-ir,  ldl cholesterol change with statins,  microalbuminuria,  parkinsons disease
GTEx eQTL Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts

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