rs4358082 chr2:20186578 C>T
- Sequence
cccagtaacttctctgccagtcat[C/T]ggctgctgctcctgtccctttgag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- PKNX1_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PKNX1_HUMAN | n/a | 2.86 | 2.00 | 3.08 | Concordant | |||
| FOXK2_HUMAN | 1.89 | -3.73 | 1.50 | n/a | No Hit |
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Motif analysis
