rs4362940 chr5:124599687 G>C
- Sequence
ctcagtcaggtgtcaagcagaaca[G/C]aggcacaagcacacaagcaagttt
- ASB in cell types
- VCaP (prostate carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- GATA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | 1.56 | -0.67 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, diastolic blood pressure (dbp), height, infant head circumference, ldl cholesterol, systolic blood pressure (sbp)