rs4368378 chr2:42510670 G>A
- Sequence
aaaatatggggaaaaaaatgtaga[G/A]ggctgttgccctgggggtagattg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 0.24 | 1.78 | 1.25 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP body mass index (bmi), diastolic blood pressure (dbp), fasting insulin, homa-ir, ldl cholesterol, systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta, Brain_Hippocampus, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Transverse, Muscle_Skeletal, Nerve_Tibial, Pancreas, Spleen, Thyroid, Whole_Blood