rs4370428 chr7:1812633 T>C
- Sequence
cctggcaattacagttgattgctg[T/C]agcactaatcccttaaaattagtc
- ASB in cell types
- LNCaP (prostate carcinoma) foreskin keratinocyte glioblastoma cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.03 | 0.34 | 1.68 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Frontal_Cortex_BA9, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid