rs4371856 chr6:137957404 A>G

Sequence
tattctgaccacaaggaatctagc[A/G]gttaacaaagtggacaagatccat
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFIC_HUMAN ARNT_HUMAN KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIC_HUMAN -2.52 2.62 1.000.02 1.00 n/a No Hit
ARNT_HUMAN -0.41 2.61 0.890.02 1.50 n/a No Hit
KDM1A_HUMAN -0.76 1.94 1.000.05 1.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg Testis

Download