rs4372735 chr17:50898871 A>C
- Sequence
cccccaaggaaggaattggtgggc[A/C]aagtattttaagaagcagaatcaa
- ASB for transcription factors
- ZN555_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN555_HUMAN | 2.58 | -1.59 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP homa-b, mitral annular calcium, obesity with early age of onset (age >2), parkinsons disease, sporadic creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Liver, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Small_Intestine_Terminal_Ileum, Stomach, Testis, Thyroid, Uterus, Whole_Blood