rs4375593 chr14:94600896 G>A
- Sequence
gtaaatagcccatgattatctcac[G/A]gagttcctgagggtcaggaatcca
- ASB in cell types
- BEAS-2B (bronchial epithelium) Detroit 562 (Pharyngeal squamous cell carcinoma) HUVEC-C (HUVEC, umbilical vein endothelial cells) HEK293 (embryonic kidney)
- ASB for transcription factors
- GCR_HUMAN TF65_HUMAN ZN660_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.49 | -0.09 | 1.00 | n/a | No Hit | |||
| TF65_HUMAN | 1.72 | -0.38 | 2.83 | n/a | No Hit | |||
| ZN660_HUMAN | n/a | 3.47 | 2.00 | -0.13 | Weak Discordant |
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Motif analysis
