rs4376777 chr1:45284935 A>G
- Sequence
tggctgggagggtcctacacccac[A/G]gagcctccctcattgctagcacag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 0.17 | 2.09 | 1.00 | 2.95 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Breast_Mammary_Tissue, Colon_Sigmoid, Heart_Atrial_Appendage, Muscle_Skeletal, Nerve_Tibial, Pancreas, Stomach, Testis, Thyroid