rs4380085 chr17:16895943 C>T

Sequence
tgcagtggtgcaatctcggctcac[C/T]gcaagctccgcctcccaggttcag
ASB in cell types
MCF10A (breast epithelial cells) SU-DHL-1 (Anaplastic large cell lymphoma)
ASB for transcription factors
TEAD4_HUMAN CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TEAD4_HUMAN 2.84 -2.58 0.011.00 1.00 n/a No Hit
CEBPB_HUMAN 1.88 0.19 0.020.83 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Breast_Mammary_Tissue Cells_Cultured_fibroblasts Liver Stomach

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