rs4380205 chr16:46390831 A>G
- Sequence
caaatggaatcgaatggaatcatc[A/G]tcgaatggaatcgaatggaatcat
- ASB in cell types
- HEK293 (embryonic kidney) GBM39 (Human brain tumor) upper lobe of left lung pancreas
- ASB for transcription factors
- ZBT26_HUMAN ZN366_HUMAN SKIL_HUMAN ZN189_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT26_HUMAN | 2.57 | n/a | 1.50 | n/a | No Hit | |||
| ZN366_HUMAN | 3.20 | n/a | 1.50 | n/a | n/a | |||
| SKIL_HUMAN | n/a | 2.48 | 3.25 | n/a | n/a | |||
| ZN189_HUMAN | n/a | 1.28 | 2.50 | 0.33 | Weak Concordant | |||
| SP2_HUMAN | n/a | 1.11 | 2.00 | n/a | No Hit |
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Motif analysis
