rs4380500 chr4:173227417 C>T
- Sequence
tcgatcttggctcactgcaagctc[C/T]gcctcccaggttcacgccattctc
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 1.30 | -0.13 | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Substantia_nigra, Breast_Mammary_Tissue, Colon_Sigmoid, Skin_Sun_Exposed_Lower_leg, Thyroid