rs4387369 chr11:76235458 T>G
- Sequence
cggccgggacgggaaggcgcaggc[T/G]ctagggtgcctcctattctactta
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) VCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN KLF5_HUMAN CEBPB_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.34 | -0.38 | 1.55 | n/a | No Hit | |||
| KLF5_HUMAN | 2.74 | n/a | 1.00 | n/a | No Hit | |||
| CEBPB_HUMAN | 2.38 | 0.38 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP hypertension (early onset hypertension), pericardial fat, serum creatinine, variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas