rs4387643 chr17:82345351 G>A

Sequence
acctcagttacagattagaagtta[G/A]tcacttagtcttcagatgaatgca
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
BRCA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRCA1_HUMAN 3.30 n/a 8.4·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Brain_Cerebellum Brain_Nucleus_accumbens_basal_ganglia Cells_Cultured_fibroblasts Heart_Atrial_Appendage Prostate Skin_Not_Sun_Exposed_Suprapubic Testis

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