rs4388226 chr5:173284037 C>T
- Sequence
tgtggcctggtgcgggggctcctc[C/T]tgctcactgggggcgcgtcccggt
- ASB in cell types
- HepG2 (hepatoblastoma) K562 (myelogenous leukemia) Kelly (neuroblastoma) GM12891 (male B- cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCFL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCFL_HUMAN | 1.75 | 0.86 | 1.20 | -1.66 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
