rs4388287 chr6:55528859 C>T
- Sequence
tacacgtctcaagagtgaccaaaa[C/T]aggaagcatatgacccaaactctt
- ASB in cell types
- pancreas THP-1 (acute monocytic leukemia) GM18505 (female B-cells Lymphoblastoid Cell Lines) PC9 (lung adenocarcinoma)
- ASB for transcription factors
- ELF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | 1.95 | -1.33 | 1.17 | -4.01 | Concordant |
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Motif analysis
