rs4389306 chr2:11693333 G>A

Sequence
gccaggcttgggaaacactgatct[G/A]gagatcccagaattttctaacgtg
ASB in cell types
pancreas monocytes from periferal blood
ASB for transcription factors
SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRBP2_HUMAN 2.07 n/a 0.051.00 3.00 -3.45 Concordant
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Motif analysis

SRBP2_HUMAN Concordant
SRBP2_HUMAN pic

Genetic associations

GRASP adiponectin levels,  autism,  comorbid depressive syndrome and alcohol dependence,  diastolic blood pressure (dbp),  hypertension (early onset hypertension),  systolic blood pressure (sbp)
GTEx eQTL Muscle_Skeletal,  Nerve_Tibial

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