rs4391967 chr14:49767859 C>T

Sequence
aagaaaaaaaaaattgcggcaatc[C/T]ggctaaaattcagcagctttcagg
ASB in cell types
primary B-CLL cells 22RV1 (prostate carcinoma) adult erythroblasts
ASB for transcription factors
RBBP5_HUMAN ANDR_HUMAN BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN n/a 2.84 1.001.6·10-3 2.50 n/a n/a
ANDR_HUMAN -0.95 2.61 1.004.6·10-3 2.00 n/a No Hit
BRD4_HUMAN -0.13 2.60 0.870.01 1.80 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP aortic valve calcium,  asthma,  transmission distortion
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Brain_Cerebellum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Small_Intestine_Terminal_Ileum,  Spleen,  Testis,  Thyroid,  Whole_Blood

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