rs4395805 chr7:142104945 T>C
- Sequence
taagcctgaaacaaaagttttctt[T/C]cagttttgcattctttacagttat
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- TBX3_HUMAN FOXP1_HUMAN SOX13_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | 2.59 | -2.69 | 1.00 | n/a | No Hit | |||
| FOXP1_HUMAN | 2.35 | -1.88 | 1.00 | n/a | No Hit | |||
| SOX13_HUMAN | 2.28 | -4.15 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg