rs4401092 chr17:80752394 A>G
- Sequence
ggaagggaggcattgcttgtgcgc[A/G]gctgctgtgcctcccccagctgaa
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- FLI1_HUMAN SMCA4_HUMAN ETS1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FLI1_HUMAN | 2.91 | -2.38 | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 2.16 | -0.52 | 1.00 | n/a | n/a | |||
| ETS1_HUMAN | 2.36 | -2.02 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood