rs4411107 chr1:215115576 C>T
- Sequence
actcaaatcctattttaaggacaa[C/T]ctcttttaaaggaactgcctagat
- ASB in cell types
- A1-2 (breast cancer cells) T47D (invasive ductal carcinoma) breast tumor
- ASB for transcription factors
- PRGR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PRGR_HUMAN | -0.10 | 1.37 | 1.38 | 1.34 | Weak Concordant |
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Motif analysis
