rs4414090 chr1:76451462 T>A
- Sequence
gattcagttacctcccactgggtg[T/A]ctcccaggacacatggggattatg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.37 | n/a | 1.50 | -0.42 | Weak Concordant |
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Motif analysis
