rs4418255 chr7:47669842 C>T
- Sequence
catctcagcactttgaaaggccaa[C/T]gagggaggactgcttgagcccagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CBP_HUMAN IKZF2_HUMAN IKZF1_HUMAN SMCA5_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CBP_HUMAN | -1.32 | 2.39 | 2.00 | n/a | n/a | |||
| IKZF2_HUMAN | -0.94 | 1.57 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 0.07 | 1.56 | 1.62 | n/a | n/a | |||
| SMCA5_HUMAN | 0.26 | 2.81 | 1.67 | n/a | n/a | |||
| STAG1_HUMAN | 0.08 | 1.57 | 1.17 | n/a | n/a |
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