rs4420146 chr1:202161038 G>A
- Sequence
ctccctcaaggccctctccctcaa[G/A]gccctctccctcaaagcccttgct
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.57 | 0.96 | 2.95 | |||
| GM12878 (female B-cells lymphoblastoid cell line) | n/a | 1.96 | 1.00 |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Testis, Thyroid