rs4420270 chr11:9314774 G>A
- Sequence
gaggtggccgccgggcgctggggc[G/A]agagcatgcgcagtcgcggcactc
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) MOLT-4 (Adult T acute lymphoblastic leukemia) MDA-MB-231 (breast adenocarcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN BC11B_HUMAN JUN_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 2.03 | -0.04 | 1.00 | n/a | n/a | |||
| BC11B_HUMAN | 1.53 | -0.97 | 1.50 | n/a | n/a | |||
| JUN_HUMAN | 0.72 | 1.77 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Pancreas, Prostate, Testis, Whole_Blood