rs4420280 chr11:121575350 C>A
- Sequence
cctccgaaggagacattatgcaat[C/A]agcatggtgtgccagattgaggca
- ASB in cell types
- CD14+ monocytes GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAT1_HUMAN TADBP_HUMAN TF65_HUMAN ZN687_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.83 | 1.22 | 1.80 | n/a | No Hit | |||
| TADBP_HUMAN | -2.46 | 2.80 | 1.00 | n/a | n/a | |||
| TF65_HUMAN | n/a | 2.21 | 3.00 | n/a | No Hit | |||
| ZN687_HUMAN | -1.52 | 1.80 | 1.00 | n/a | n/a |
Items per page:
1 – 4 of 4