rs4423408 chr16:85227355 C>T
- Sequence
ctactgcacgcaggcctcttctca[C/T]ggacctcaacggtgggtatgtcca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line ) MS-1 (Small cell lung carcinoma)
- ASB for transcription factors
- FOXK2_HUMAN AHR_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.08 | n/a | 1.50 | n/a | No Hit | |||
| AHR_HUMAN | 1.43 | n/a | 1.50 | n/a | No Hit | |||
| STAG1_HUMAN | 2.07 | -1.50 | 1.00 | n/a | n/a |
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