rs4428519 chr6:139370178 G>A
- Sequence
agaactttttgacaaacagccaag[G/A]tacagaggtcaaatttccccatat
- ASB in cell types
- HepG2 (hepatoblastoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- NFIA_HUMAN ANDR_HUMAN CEBPA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NFIA_HUMAN | 2.26 | n/a | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.55 | -1.46 | 2.00 | 1.11 | Weak Discordant | |||
| CEBPA_HUMAN | 2.61 | n/a | 3.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
