rs4428966 chr10:15180988 C>T

Sequence
tgagtaagtcaccctttggccata[C/T]tctcaaaggctcacaaagatagac
ASB in cell types
LHSAR (prostate epithelial cells)
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LHSAR (prostate epithelial cells) n/a 3.10 1.008.7·10-4 1.50
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale,  fasting blood glucose,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Brain_Caudate_basal_ganglia,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Putamen_basal_ganglia,  Colon_Sigmoid,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach

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