rs4429536 chr20:19459524 C>T
- Sequence
gttctgtatgcctttgagacatca[C/T]gtaaatgtttattgattttcattg
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.15 | 2.31 | 1.77 | 3.06 | Concordant | |||
| FOXA1_HUMAN | -0.58 | 1.79 | 1.41 | 2.01 | Concordant |
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Motif analysis
