rs4438849 chr5:104559401 T>G
- Sequence
atcttcaggttagtacctgtactc[T/G]ttcaacaagacctcatctttttaa
- ASB in cell types
- 22RV1 (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.61 | -0.29 | 1.52 | -0.49 | Weak Concordant | |||
| FOXA1_HUMAN | 1.39 | 0.25 | 1.33 | -1.06 | Weak Concordant |
Items per page:
1 – 2 of 2
Motif analysis
