rs4443371 chr5:52497426 T>C
- Sequence
caagccctctcttctcaatctaag[T/C]ctttaaattcaggaaagctaaggt
- ASB in cell types
- D283 Med (medulloblastoma)
- ASB for transcription factors
- OTX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| OTX2_HUMAN | -0.48 | 1.39 | 1.12 | 3.22 | Concordant |
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Motif analysis
Genetic associations
GRASP body mass index (bmi), cystatin c in serum, fasting blood glucose, serum creatinine, years of education