rs4443649 chr8:67811047 T>G
- Sequence
tgagcaagctgttctttaacattt[T/G]tccacattctttttaggttttatt
- ASB in cell types
- LNCaP (prostate carcinoma) LNCaP95 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN A2NVP9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.45 | 2.35 | 1.68 | 2.96 | Concordant | |||
| FOXA1_HUMAN | -0.25 | 1.25 | 1.42 | n/a | No Hit | |||
| A2NVP9_HUMAN | -0.98 | 3.17 | 1.33 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
