rs4444866 chr4:40305516 C>T
- Sequence
tcggcagtgccatctgagtagaag[C/T]gaagtagaaacttcttggttggta
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells primary B-CLL cells CD14+ monocytes
- ASB for transcription factors
- FOXK2_HUMAN CBP_HUMAN BRD4_HUMAN STAT1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.77 | n/a | 1.00 | n/a | No Hit | |||
| CBP_HUMAN | 3.12 | n/a | 2.00 | n/a | n/a | |||
| BRD4_HUMAN | 2.17 | 0.34 | 2.33 | n/a | n/a | |||
| STAT1_HUMAN | 2.40 | -1.43 | 2.00 | 0.48 | Weak Discordant |
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Motif analysis
