rs4445576 chr10:46549754 G>C
- Sequence
ccagcatcctgggctgacagcggg[G/C]atgcctctgcaggggccaagtcat
- ASB in cell types
- MCF10A (breast epithelial cells) PANC1 (pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN TEAD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.14 | -0.17 | 1.25 | n/a | No Hit | |||
| ZFX_HUMAN | 1.44 | -0.90 | 1.17 | n/a | No Hit | |||
| TEAD4_HUMAN | 2.62 | -2.34 | 1.00 | 2.26 | Discordant |
Items per page:
1 – 3 of 3
Motif analysis
