rs4448355 chr9:111520765 T>C
- Sequence
tgagccagcacgcccggccaaacc[T/C]aatctactcttatcaagcttcaga
- ASB in cell types
- iPSC (induced pluripotent stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | 3.50 | -3.84 | 1.00 | -1.22 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP barnes akathisia rating scale, bipolar disorder, birth weight, crohns disease, gender differentiated, hdl cholesterol, height, height in type 2 diabetes cases, simpson-angus scale
GTEx eQTL Brain_Spinal_cord_cervical_c-1, Breast_Mammary_Tissue, Esophagus_Mucosa, Muscle_Skeletal, Nerve_Tibial, Ovary, Thyroid