rs4449426 chr4:123849688 A>G
- Sequence
accaagaaaagccaagaaaagttt[A/G]cagctctataaatctcaagctata
- ASB in cell types
- LNCaP (prostate carcinoma) TTC-1240 (Rhabdoid tumor of the kidney) LNCaP95
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 3.10 | n/a | 1.88 | n/a | No Hit | |||
| ANDR_HUMAN | 1.77 | -0.21 | 1.68 | -2.36 | Concordant |
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Motif analysis
