rs4450000 chr1:193122854 C>G
- Sequence
gggaatcaaccctgaagttaggac[C/G]ggaaagaaatttggtgaatttgga
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.17 | 1.03 | 2.97 |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, adiponectin levels, ldl cholesterol, mitral annular calcium, severe diabetic retinopathy
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Sigmoid, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Whole_Blood