rs4451608 chr10:68173481 C>A

Sequence
atacaaagaatacagtgtgaagga[C/A]gcccttggaaagaaggaaagacaa
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
FOXA2_HUMAN SOX13_HUMAN FOXP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXA2_HUMAN 2.76 -4.23 3.1·10-31.00 1.33 n/a No Hit
SOX13_HUMAN 2.47 -4.30 3.8·10-31.00 1.50 n/a No Hit
FOXP1_HUMAN 2.25 -1.02 5.1·10-31.00 1.25 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  chronic kidney disease,  height,  homa-b,  ldl cholesterol,  microalbuminuria,  serum creatinine,  systolic blood pressure (sbp)
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Tibial,  Colon_Transverse,  Muscle_Skeletal,  Testis

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